org.jmol.shape

Class Sticks

java.lang.Object

org.jmol.shape.Shape

org.jmol.shape.Sticks

public class Sticks
extends Shape

Field Summary

Fields

Modifier and Type	Field and Description
private java.util.BitSet	bsColixSet
private java.util.BitSet	bsOrderSet
private java.util.BitSet	bsSizeSet
private static int	MAX_BOND_CLICK_DISTANCE_SQUARED
private int	myMask
private javax.vecmath.Point3i	ptXY
private boolean	reportAll
private java.util.BitSet	selectedBonds

Fields inherited from class org.jmol.shape.Shape

g3d, isBioShape, modelSet, myVisibilityFlag, RADIUS_MAX, shapeID, translucentAllowed, translucentLevel, viewer, xmlProperties

Constructor Summary

Constructors

Constructor and Description
Sticks()

Method Summary

Methods

Modifier and Type	Method and Description
java.util.Map<java.lang.String,java.lang.Object>	checkObjectClicked(int x, int y, int modifiers, java.util.BitSet bsVisible)
boolean	checkObjectHovered(int x, int y, java.util.BitSet bsVisible)
private Bond	findPickedBond(int x, int y, java.util.BitSet bsVisible, javax.vecmath.Point3f pt)
java.lang.Object	getProperty(java.lang.String property, int index)
java.lang.String	getShapeState()
void	initShape()
void	setModelClickability()
void	setProperty(java.lang.String propertyName, java.lang.Object value, java.util.BitSet bs) may come from any source -- executed AFTER a shape's own setProperty method
protected void	setSize(int size, java.util.BitSet bsSelected) sets the size of a bond, or sets the selectedBonds set

Methods inherited from class org.jmol.shape.Shape

appendCmd, checkBoundsMinMax, checkObjectDragged, coordinateInRange, encodeColor, findNearestAtomIndex, getColix, getColorCommand, getColorCommand, getFontCommand, getIndexFromName, getProperty, getShapeCommands, getShapeCommands, getShapeDetail, getSize, getSize, getTranslucentLabel, getViewer, initializeShape, initModelSet, merge, setColix, setColix, setColix, setModelSet, setShapeProperty, setShapeSize, setSize, setStateInfo, setStateInfo, setVisibilityFlags, wasClicked

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

myMask

private int myMask

reportAll

private boolean reportAll

bsOrderSet

private java.util.BitSet bsOrderSet

bsSizeSet

private java.util.BitSet bsSizeSet

bsColixSet

private java.util.BitSet bsColixSet

selectedBonds

private java.util.BitSet selectedBonds

MAX_BOND_CLICK_DISTANCE_SQUARED

private static final int MAX_BOND_CLICK_DISTANCE_SQUARED

See Also:

Constant Field Values

ptXY

private final javax.vecmath.Point3i ptXY

Constructor Detail

Sticks

public Sticks()

Method Detail

initShape

public void initShape()

Overrides:

initShape in class Shape

setSize

protected void setSize(int size,
           java.util.BitSet bsSelected)

sets the size of a bond, or sets the selectedBonds set

Overrides:

setSize in class Shape

Parameters:

size -

bsSelected -

setProperty

public void setProperty(java.lang.String propertyName,
               java.lang.Object value,
               java.util.BitSet bs)

Description copied from class: Shape

may come from any source -- executed AFTER a shape's own setProperty method

Overrides:

setProperty in class Shape

getProperty

public java.lang.Object getProperty(java.lang.String property,
                           int index)

Overrides:

getProperty in class Shape

Returns:

true if serviced

setModelClickability

public void setModelClickability()

Overrides:

setModelClickability in class Shape

getShapeState

public java.lang.String getShapeState()

Overrides:

getShapeState in class Shape

checkObjectHovered

public boolean checkObjectHovered(int x,
                         int y,
                         java.util.BitSet bsVisible)

Overrides:

checkObjectHovered in class Shape

Returns:

T/F

checkObjectClicked

public java.util.Map<java.lang.String,java.lang.Object> checkObjectClicked(int x,
                                                                  int y,
                                                                  int modifiers,
                                                                  java.util.BitSet bsVisible)

Overrides:

checkObjectClicked in class Shape

Returns:

Hashtable containing information about pt clicked

findPickedBond

private Bond findPickedBond(int x,
                  int y,
                  java.util.BitSet bsVisible,
                  javax.vecmath.Point3f pt)

Parameters:

x -

y -

bsVisible - UNUSED?

pt -

Returns:

picked bond or null